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We will restrict our modelling of rate heterogeneity to among-site heterogeneity within each partition, and also allow the partitions to have different mean rates of evolution.

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You will need the following software at your disposal: This tutorial will guide you through the analysis of an alignment of sequences sampled from twelve primate species (see Figure 1).

The goal is to estimate the phylogeny, the rate of evolution on each lineage and the ages of the uncalibrated ancestral divergences.

The fact that it can run for 90 minutes at a time means you’ll have enough time to get the facts on tape and once the battery is dead you can simply recharge the Lithium Ion battery.

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The first step will be to convert a NEXUS file with a DATA or CHARACTERS block into a BEAST XML input file.